Acharya et al.11 applied different FS methods to classify Alzheimers disease using MRI images. Building a custom CNN model: Identification of COVID-19 - Analytics Vidhya \(\Gamma (t)\) indicates gamma function. It classifies the chest X-ray images into three categories that includes Covid-19, Pneumonia and normal. The whole dataset contains around 200 COVID-19 positive images and 1675 negative COVID19 images. Generally, the most stable algorithms On dataset 1 are WOA, SCA, HGSO, FO-MPA, and SGA, respectively. For this motivation, we utilize the FC concept with the MPA algorithm to boost the second step of the standard version of the algorithm. Duan et al.13 applied the Gaussian mixture model (GMM) to extract features from pulmonary nodules from CT images. Acharya, U. R. et al. [PDF] COVID-19 Image Data Collection | Semantic Scholar implemented the deep neural networks and classification as well as prepared the related figures and manuscript text. Liao, S. & Chung, A. C. Feature based nonrigid brain mr image registration with symmetric alpha stable filters. Chollet, F. Xception: Deep learning with depthwise separable convolutions. A. et al. & Carlsson, S. Cnn features off-the-shelf: an astounding baseline for recognition. The proposed COVID-19 X-ray classification approach starts by applying a CNN (especially, a powerful architecture called Inception which pre-trained on Imagnet dataset) to extract the discriminant features from raw images (with no pre-processing or segmentation) from the dataset that contains positive and negative COVID-19 images. Therefore, several pre-trained models have won many international image classification competitions such as VGGNet24, Resnet25, Nasnet26, Mobilenet27, Inception28 and Xception29. Using X-ray images we can train a machine learning classifier to detect COVID-19 using Keras and TensorFlow. The survey asked participants to broadly classify the findings of each chest CT into one of the four RSNA COVID-19 imaging categories, then select which imaging features led to their categorization. The combination of SA and GA showed better performances than the original SA and GA. Narayanan et al.33 proposed a fuzzy particle swarm optimization (PSO) as an FS method to enhance the classification of CT images of emphysema. For instance,\(1\times 1\) conv. In this paper, after applying Chi-square, the feature vector is minimized for both datasets from 51200 to 2000. So, based on this motivation, we apply MPA as a feature selector from deep features that produced from CNN (largely redundant), which, accordingly minimize capacity and resources consumption and can improve the classification of COVID-19 X-ray images. Based on Standard Deviation measure (STD), the most stable algorithms were SCA, SGA, BPSO, and bGWO, respectively. 35, 1831 (2017). Cauchemez, S. et al. Apostolopoulos, I. D. & Mpesiana, T. A. Covid-19: automatic detection from x-ray images utilizing transfer learning with convolutional neural networks. Syst. Also, image segmentation can extract critical features, including the shape of tissues, and texture5,6. Article Szegedy, C. et al. The next process is to compute the performance of each solution using fitness value and determine which one is the best solution. As seen in Table1, we keep the last concatenation layer which contains the extracted features, so we removed the top layers such as the Flatten, Drop out and the Dense layers which the later performs classification (named as FC layer). Sci. 517 PDF Ensemble of Patches for COVID-19 X-Ray Image Classification Thiago Chen, G. Oliveira, Z. Dias Medicine In my thesis project, I developed an image classification model to detect COVID-19 on chest X-ray medical data using deep learning models such . In the meantime, to ensure continued support, we are displaying the site without styles ADS Bibliographic details on CECT: Controllable Ensemble CNN and Transformer for COVID-19 image classification by capturing both local and global image features. Accordingly, the prey position is upgraded based the following equations. Types of coronavirus, their symptoms, and treatment - Medical News Today The results showed that the proposed approach showed better performances in both classification accuracy and the number of extracted features that positively affect resource consumption and storage efficiency. CNNs are more appropriate for large datasets. Biases associated with database structure for COVID-19 detection in X 97, 849872 (2019). Also, all other works do not give further statistics about their models complexity and the number of featurset produced, unlike, our approach which extracts the most informative features (130 and 86 features for dataset 1 and dataset 2) that imply faster computation time and, accordingly, lower resource consumption. Get the most important science stories of the day, free in your inbox. Besides, the binary classification between two classes of COVID-19 and normal chest X-ray is proposed. Kong, Y., Deng, Y. Use of chest ct in combination with negative rt-pcr assay for the 2019 novel coronavirus but high clinical suspicion. Some people say that the virus of COVID-19 is. The model was developed using Keras library47 with Tensorflow backend48. COVID-19 Detection via Image Classification using Deep Learning on Stage 2: The prey/predator in this stage begin exploiting the best location that detects for their foods. }\delta (1-\delta )(2-\delta ) U_{i}(t-2)\\&\quad + \frac{1}{4! New Images of Novel Coronavirus SARS-CoV-2 Now Available Article wrote the intro, related works and prepare results. Authors If material is not included in the article's Creative Commons license and your intended use is not permitted by statutory regulation or exceeds the permitted use, you will need to obtain permission directly from the copyright holder. Classification of COVID-19 X-ray images with Keras and its - Medium Arijit Dey, Soham Chattopadhyay, Ram Sarkar, Dandi Yang, Cristhian Martinez, Jesus Carretero, Jess Alejandro Alzate-Grisales, Alejandro Mora-Rubio, Reinel Tabares-Soto, Lo Dumortier, Florent Gupin, Thomas Grenier, Linda Wang, Zhong Qiu Lin & Alexander Wong, Afnan Al-ali, Omar Elharrouss, Somaya Al-Maaddeed, Robbie Sadre, Baskaran Sundaram, Daniela Ushizima, Zahid Ullah, Muhammad Usman, Jeonghwan Gwak, Scientific Reports While the second dataset, dataset 2 was collected by a team of researchers from Qatar University in Qatar and the University of Dhaka in Bangladesh along with collaborators from Pakistan and Malaysia medical doctors44. Evaluate the proposed approach by performing extensive comparisons to several state-of-art feature selection algorithms, most recent CNN architectures and most recent relevant works and existing classification methods of COVID-19 images. arXiv preprint arXiv:2003.13145 (2020). Automated detection of covid-19 cases using deep neural networks with x-ray images. arXiv preprint arXiv:2003.11597 (2020). Afzali et al.15 proposed an FS method based on principal component analysis and contour-based shape descriptors to detect Tuberculosis from lung X-Ray Images. The proposed cascaded system is proposed to segment the lung, detect, localize, and quantify COVID-19 infections from computed tomography images, which can reliably localize infections of various shapes and sizes, especially small infection regions, which are rarely considered in recent studies. With the help of numerous algorithms in AI, modern COVID-19 cases can be detected and managed in a classified framework. Four measures for the proposed method and the compared algorithms are listed. Currently, we witness the severe spread of the pandemic of the new Corona virus, COVID-19, which causes dangerous symptoms to humans and animals, its complications may lead to death. Lett. Deep Learning Based Image Classification of Lungs Radiography for Detecting COVID-19 using a Deep CNN and ResNet 50 PVT-COV19D: COVID-19 Detection Through Medical Image Classification Int. arXiv preprint arXiv:2004.07054 (2020). The images or other third party material in this article are included in the article's Creative Commons license, unless indicated otherwise in a credit line to the material. (14)(15) to emulate the motion of the first half of the population (prey) and Eqs. The Softmax activation function is used for this purpose because the output should be binary (positive COVID-19 negative COVID-19). Among the FS methods, the metaheuristic techniques have been established their performance overall other FS methods when applied to classify medical images. One of the main disadvantages of our approach is that its built basically within two different environments. A joint segmentation and classification framework for COVID19 where \(ni_{j}\) is the importance of node j, while \(w_{j}\) refers to the weighted number of samples reaches the node j, also \(C_{j}\) determines the impurity value of node j. left(j) and right(j) are the child nodes from the left split and the right split on node j, respectively. As Inception examines all X-ray images over and over again in each epoch during the training, these rapid ups and downs are slowly minimized in the later part of the training. The results show that, using only 6 epochs for training, the CNNs achieved very high performance on the classification task. 121, 103792 (2020). Also, WOA algorithm showed good results in all measures, unlike dataset 1, which can conclude that no algorithm can solve all kinds of problems. In Smart Intelligent Computing and Applications, 305313 (Springer, 2019). and JavaScript. SARS-CoV-2 Variant Classifications and Definitions Future Gener. Generally, the proposed FO-MPA approach showed satisfying performance in both the feature selection ratio and the classification rate. Classification of COVID-19 X-ray images with Keras and its potential problem | by Yiwen Lai | Analytics Vidhya | Medium Write Sign up 500 Apologies, but something went wrong on our end.. \(Fit_i\) denotes a fitness function value. We can call this Task 2. The results indicate that all CNN-based architectures outperform the ViT-based architecture in the binary classification of COVID-19 using CT images. Havaei, M. et al. Appl. The \(\delta\) symbol refers to the derivative order coefficient. For example, Da Silva et al.30 used the genetic algorithm (GA) to develop feature selection methods for ranking the quality of medical images. A.T.S. (14)-(15) are implemented in the first half of the agents that represent the exploitation. Table3 shows the numerical results of the feature selection phase for both datasets. Adv. Tree based classifier are the most popular method to calculate feature importance to improve the classification since they have high accuracy, robustness, and simple38. Sign up for the Nature Briefing newsletter what matters in science, free to your inbox daily. Appl. Google Scholar. The memory terms of the prey are updated at the end of each iteration based on first in first out concept. Luz, E., Silva, P.L., Silva, R. & Moreira, G. Towards an efficient deep learning model for covid-19 patterns detection in x-ray images. In this experiment, the selected features by FO-MPA were classified using KNN. In our experiment, we randomly split the data into 70%, 10%, and 20% for training, validation, and testing sets, respectively. The proposed IFM approach is summarized as follows: Extracting deep features from Inception, where about 51 K features were extracted. They achieved 98.08 % and 96.51 % of accuracy and F-Score, respectively compared to our approach with 98.77 % and 98.2% for accuracy and F-Score, respectively. 132, 8198 (2018). The memory properties of Fc calculus makes it applicable to the fields that required non-locality and memory effect. Image segmentation is a necessary image processing task that applied to discriminate region of interests (ROIs) from the area of outsides. The variants of concern are Alpha, Beta, Gamma, and than the COVID-19 images. Whereas, FO-MPA, MPA, HGSO, and WOA showed similar STD results. Objective: To help improve radiologists' efficacy of disease diagnosis in reading computed tomography (CT) images, this study aims to investigate the feasibility of applying a modified deep learning (DL) method as a new strategy to automatically segment disease-infected regions and predict disease severity. As seen in Fig. ), such as \(5\times 5\), \(3 \times 3\), \(1 \times 1\). Multimedia Tools Appl. Computer Department, Damietta University, Damietta, Egypt, Electrical Engineering Department, Faculty of Engineering, Fayoum University, Fayoum, Egypt, State Key Laboratory for Information Engineering in Surveying, Mapping, and Remote Sensing, Wuhan University, Wuhan, China, Department of Applied Informatics, Vytautas Magnus University, Kaunas, Lithuania, Department of Mathematics, Faculty of Science, Zagazig University, Zagazig, Egypt, School of Computer Science and Robotics, Tomsk Polytechnic University, Tomsk, Russia, You can also search for this author in Figure7 shows the most recent published works as in54,55,56,57 and44 on both dataset 1 and dataset 2. & SHAH, S. S.H. The diagnostic evaluation of convolutional neural network (cnn) for the assessment of chest x-ray of patients infected with covid-19. In9, to classify ultrasound medical images, the authors used distance-based FS methods and a Fuzzy Support Vector Machine (FSVM). COVID-19 image classification using deep learning: Advances - PubMed The conference was held virtually due to the COVID-19 pandemic. In Medical Imaging 2020: Computer-Aided Diagnosis, vol. Eng. However, some of the extracted features by CNN might not be sufficient, which may affect negatively the quality of the classification images. Article Eq. The shape of the output from the Inception is (5, 5, 2048), which represents a feature vector of size 51200. }, \end{aligned}$$, $$\begin{aligned} D^{\delta }[U(t)]=\frac{1}{T^\delta }\sum _{k=0}^{m} \frac{(-1)^k\Gamma (\delta +1)U(t-kT)}{\Gamma (k+1)\Gamma (\delta -k+1)} \end{aligned}$$, $$\begin{aligned} D^1[U(t)]=U(t+1)-U(t) \end{aligned}$$, $$\begin{aligned} U=Lower+rand_1\times (Upper - Lower ) \end{aligned}$$, $$\begin{aligned} Elite=\left[ \begin{array}{cccc} U_{11}^1&{}U_{12}^1&{}\ldots &{}U_{1d}^1\\ U_{21}^1&{}U_{22}^1&{}\ldots &{}U_{2d}^1\\ \ldots &{}\ldots &{}\ldots &{}\ldots \\ U_{n1}^1&{}U_{n2}^1&{}\ldots &{}U_{nd}^1\\ \end{array}\right] , \, U=\left[ \begin{array}{cccc} U_{11}&{}U_{12}&{}\ldots &{}U_{1d}\\ U_{21}&{}U_{22}&{}\ldots &{}U_{2d}\\ \ldots &{}\ldots &{}\ldots &{}\ldots \\ U_{n1}&{}U_{n2}&{}\ldots &{}U_{nd}\\ \end{array}\right] , \, \end{aligned}$$, $$\begin{aligned} S_i&= {} R_B \bigotimes (Elite_i-R_B\bigotimes U_i), i=1,2,\ldots ,n \end{aligned}$$, $$\begin{aligned} U_i&= {} U_i+P.R\bigotimes S_i \end{aligned}$$, \(\frac{1}{3}t_{max}< t< \frac{2}{3}t_{max}\), $$\begin{aligned} S_i&= {} R_L \bigotimes (Elite_i-R_L\bigotimes U_i), i=1,2,\ldots ,n/2 \end{aligned}$$, $$\begin{aligned} S_i&= {} R_B \bigotimes (R_B \bigotimes Elite_i- U_i), i=1,2,\ldots ,n/2 \end{aligned}$$, $$\begin{aligned} U_i&= {} Elite_i+P.CF\bigotimes S_i,\, CF= \left( 1-\frac{t}{t_{max}} \right) ^{\left(2\frac{t}{t_{max}}\right) } \end{aligned}$$, $$\begin{aligned} S_i&= {} R_L \bigotimes (R_L \bigotimes Elite_i- U_i), i=1,2,\ldots ,n \end{aligned}$$, $$\begin{aligned} U_i&= {} Elite_i+P.CF\bigotimes S_i,\, CF= \left( 1-\frac{t}{t_{max}}\right) ^{\left(2\frac{t}{t_{max}} \right) } \end{aligned}$$, $$\begin{aligned} U_i=\left\{ \begin{array}{ll} U_i+CF [U_{min}+R \bigotimes (U_{max}-U_{min})]\bigotimes W &{} r_5 < FAD \\ U_i+[FAD(1-r)+r](U_{r1}-U_{r2}) &{} r_5 > FAD\\ \end{array}\right. This paper reviews the recent progress of deep learning in COVID-19 images applications from five aspects; Firstly, 33 COVID-19 datasets and data enhancement methods are introduced; Secondly, COVID-19 classification methods . COVID-19 image classification using deep features and fractional-order marine predators algorithm, $$\begin{aligned} \chi ^2=\sum _{k=1}^{n} \frac{(O_k - E_k)^2}{E_k} \end{aligned}$$, $$\begin{aligned} ni_{j}=w_{j}C_{j}-w_{left(j)}C_{left(j)}-w_{right(j)}C_{right(j)} \end{aligned}$$, $$\begin{aligned} fi_{i}=\frac{\sum _{j:node \mathbf \ {j} \ splits \ on \ feature \ i}ni_{j}}{\sum _{{k}\in all \ nodes }ni_{k}} \end{aligned}$$, $$\begin{aligned} normfi_{i}=\frac{fi_{i}}{\sum _{{j}\in all \ nodes }fi_{j}} \end{aligned}$$, $$\begin{aligned} REfi_{i}=\frac{\sum _{j \in all trees} normfi_{ij}}{T} \end{aligned}$$, $$\begin{aligned} D^{\delta }(U(t))=\lim \limits _{h \rightarrow 0} \frac{1}{h^\delta } \sum _{k=0}^{\infty }(-1)^{k} \begin{pmatrix} \delta \\ k\end{pmatrix} U(t-kh), \end{aligned}$$, $$\begin{aligned} \begin{pmatrix} \delta \\ k \end{pmatrix}= \frac{\Gamma (\delta +1)}{\Gamma (k+1)\Gamma (\delta -k+1)}= \frac{\delta (\delta -1)(\delta -2)\ldots (\delta -k+1)}{k! The different proposed models will be trained with three-class balanced dataset which consists of 3000 images, 1000 images for each class. Deep cnns for microscopic image classification by exploiting transfer learning and feature concatenation. Google Research, https://research.googleblog.com/2017/11/automl-for-large-scaleimage.html, Blog (2017). For diagnosing COVID-19, the RT-PCR (real-time polymerase chain reaction) is a standard diagnostic test, but, it can be considered as a time-consuming test, more so, it also suffers from false negative diagnosing4. IEEE Trans. One of the best methods of detecting. Whereas the worst one was SMA algorithm. Google Scholar. I am passionate about leveraging the power of data to solve real-world problems. Fractional Differential Equations: An Introduction to Fractional Derivatives, Fdifferential Equations, to Methods of their Solution and Some of Their Applications Vol. Fung, G. & Stoeckel, J. Svm feature selection for classification of spect images of alzheimers disease using spatial information. Also, other recent published works39, who combined a CNN architecture with Weighted Symmetric Uncertainty (WSU) to select optimal features for traffic classification. Going deeper with convolutions. Therefore in MPA, for the first third of the total iterations, i.e., \(\frac{1}{3}t_{max}\)). New machine learning method for image-based diagnosis of COVID-19 - PLOS Efficient classification of white blood cell leukemia with improved swarm optimization of deep features. Implementation of convolutional neural network approach for COVID-19 Moreover, other COVID-19 positive images were added by the Italian Society of Medical and Interventional Radiology (SIRM) COVID-19 Database45. International Conference on Machine Learning647655 (2014). COVID-19 tests are currently hard to come by there are simply not enough of them and they cannot be manufactured fast enough, which is causing panic. Also, they require a lot of computational resources (memory & storage) for building & training. Article "CECT: Controllable Ensemble CNN and Transformer for COVID-19 image " Multi-domain medical image translation generation for lung image & Cmert, Z. \end{aligned}$$, $$\begin{aligned} U_i(t+1)-U_i(t)=P.R\bigotimes S_i \end{aligned}$$, $$\begin{aligned} D ^{\delta } \left[ U_{i}(t+1)\right] =P.R\bigotimes S_i \end{aligned}$$, $$D^{\delta } \left[ {U_{i} (t + 1)} \right] = U_{i} (t + 1) + \sum\limits_{{k = 1}}^{m} {\frac{{( - 1)^{k} \Gamma (\delta + 1)U_{i} (t + 1 - k)}}{{\Gamma (k + 1)\Gamma (\delta - k + 1)}}} = P \cdot R \otimes S_{i} .$$, $$\begin{aligned} \begin{aligned} U(t+1)_{i}= - \sum _{k=1}^{m} \frac{(-1)^k\Gamma (\delta +1)U_{i}(t+1-k)}{\Gamma (k+1)\Gamma (\delta -k+1)} + P.R\bigotimes S_i. 0.9875 and 0.9961 under binary and multi class classifications respectively. Comput. The proposed segmentation method is capable of dealing with the problem of diffuse lung borders in CXR images of patients with COVID-19 severe or critical. 11314, 113142S (International Society for Optics and Photonics, 2020). Imag. COVID-19 image classification using deep features and fractional-order marine predators algorithm Authors. To obtain This task is achieved by FO-MPA which randomly generates a set of solutions, each of them represents a subset of potential features. It also shows that FO-MPA can select the smallest subset of features, which reflects positively on performance. Remainder sections are organized as follows: Material and methods sectionpresents the methodology and the techniques used in this work including model structure and description. The results are the best achieved on these datasets when compared to a set of recent feature selection algorithms. The predator tries to catch the prey while the prey exploits the locations of its food. Dhanachandra, N. & Chanu, Y. J. Heidari, A. 2. J. Med. In this paper, we proposed a novel COVID-19 X-ray classification approach, which combines a CNN as a sufficient tool to extract features from COVID-19 X-ray images. Latest Japan Border Entry Requirements | Rakuten Travel AMERICAN JOURNAL OF EMERGENCY MEDICINE COVID-19: Facemask use prevalence in international airports in Asia, Europe and the Americas, March 2020 In this subsection, a comparison with relevant works is discussed. PVT-COV19D: COVID-19 Detection Through Medical Image Classification Based on Pyramid Vision Transformer. In54, AlexNet pre-trained network was used to extract deep features then applied PCA to select the best features by eliminating highly correlated features. The MPA starts with the initialization phase and then passing by other three phases with respect to the rational velocity among the prey and the predator. They used different images of lung nodules and breast to evaluate their FS methods. From Fig. Both datasets shared some characteristics regarding the collecting sources. Metric learning Metric learning can create a space in which image features within the. He, K., Zhang, X., Ren, S. & Sun, J. The proposed approach was evaluated on two public COVID-19 X-ray datasets which achieves both high performance and reduction of computational complexity. Detecting COVID-19 in X-ray images with Keras - PyImageSearch Dual feature selection and rebalancing strategy using metaheuristic optimization algorithms in x-ray image datasets. The optimum path forest (OPF) classifier was applied to classify pulmonary nodules based on CT images. After applying this technique, the feature vector is minimized from 2000 to 459 and from 2000 to 462 for Dataset1 and Dataset 2, respectively. Dhanachandra and Chanu35 proposed a hybrid method of dynamic PSO and fuzzy c-means to segment two types of medical images, MRI and synthetic images. (33)), showed that FO-MPA also achieved the best value of the fitness function compared to others. (iii) To implement machine learning classifiers for classification of COVID and non-COVID image classes. 40, 2339 (2020). A comprehensive study on classification of COVID-19 on - PubMed Med. Med. Correspondence to 4a, the SMA was considered as the fastest algorithm among all algorithms followed by BPSO, FO-MPA, and HHO, respectively, while MPA was the slowest algorithm. (3), the importance of each feature is then calculated. Netw. 1. 101, 646667 (2019). A Review of Deep Learning Imaging Diagnostic Methods for COVID-19 Bukhari, S. U.K., Bukhari, S. S.K., Syed, A. COVID-19 is the most transmissible disease, caused by the SARS-CoV-2 virus that severely infects the lungs and the upper respiratory tract of the human body.This virus badly affected the lives and wellness of millions of people worldwide and spread widely. To survey the hypothesis accuracy of the models. Book COVID-19 Chest X -Ray Image Classification with Neural Network Currently we are suffering from COVID-19, and the situation is very serious. In Future of Information and Communication Conference, 604620 (Springer, 2020). Decaf: A deep convolutional activation feature for generic visual recognition. Design incremental data augmentation strategy for COVID-19 CT data. Med. So some statistical operations have been added to exclude irrelevant and noisy features, and by making it more computationally efficient and stable, they are summarized as follows: Chi-square is applied to remove the features which have a high correlation values by computing the dependence between them. Coronavirus disease (Covid-19) is an infectious disease that attacks the respiratory area caused by the severe acute . The authors declare no competing interests. <span> <h5>Background</h5> <p>The COVID19 pandemic has precipitated global apprehensions about increased fatalities and raised concerns about gaps in healthcare . As a result, the obtained outcomes outperformed previous works in terms of the models general performance measure. Purpose The study aimed at developing an AI . IRBM https://doi.org/10.1016/j.irbm.2019.10.006 (2019). Recently, a combination between the fractional calculus tool and the meta-heuristics opens new doors in providing robust and reliable variants41. We are hiring! Figure3 illustrates the structure of the proposed IMF approach. \end{aligned} \end{aligned}$$, $$\begin{aligned} \begin{aligned} U_{i}(t+1)&= \frac{1}{1!} & Mahmoud, N. Feature selection based on hybrid optimization for magnetic resonance imaging brain tumor classification and segmentation.